Gene
trim71
- ID
- ZDB-GENE-040128-1
- Name
- tripartite motif containing 71, E3 ubiquitin protein ligase
- Symbol
- trim71 Nomenclature History
- Previous Names
- Type
- protein_coding_gene
- Location
- Chr: 16 Mapping Details/Browsers
- Description
- Predicted to have miRNA binding activity; translation repressor activity; and ubiquitin protein ligase activity. Involved in embryonic body morphogenesis. Predicted to localize to P-body. Is expressed in several structures, including nervous system; neural tube; pectoral fin musculature; polster; and solid lens vesicle. Orthologous to human TRIM71 (tripartite motif containing 71).
- Genome Resources
- Note
- None
- Comparative Information
-
- All Expression Data
- 8 figures from 2 publications
- Cross-Species Comparison
- High Throughput Data
- Thisse Expression Data
-
- cb205 (10 images)
Wild Type Expression Summary
- All Phenotype Data
- 1 Figure from Lin et al., 2007
- Cross-Species Comparison
- Alliance
Phenotype Summary
Mutations
Human Disease
| Disease Ontology Term | Multi-Species Data | OMIM Term | OMIM Phenotype ID |
|---|---|---|---|
| Hydrocephalus, congenital, 4 | 618667 |
Domain, Family, and Site Summary
| Type | InterPro ID | Name |
|---|---|---|
| Conserved_site | IPR017907 | Zinc finger, RING-type, conserved site |
| Domain | IPR000315 | B-box-type zinc finger |
| Domain | IPR001841 | Zinc finger, RING-type |
| Family | IPR050952 | Tripartite Motif and NHL Repeat Containing E3 Ligases |
| Homologous_superfamily | IPR011042 | Six-bladed beta-propeller, TolB-like |
| Homologous_superfamily | IPR013083 | Zinc finger, RING/FYVE/PHD-type |
| Homologous_superfamily | IPR013783 | Immunoglobulin-like fold |
| Homologous_superfamily | IPR014756 | Immunoglobulin E-set |
| Repeat | IPR001258 | NHL repeat |
| Repeat | IPR001298 | Filamin/ABP280 repeat |
| Repeat | IPR017868 | Filamin/ABP280 repeat-like |
Domain Details Per Protein
| Protein | Length | B-box-type zinc finger | Filamin/ABP280 repeat | Filamin/ABP280 repeat-like | Immunoglobulin E-set | Immunoglobulin-like fold | NHL repeat | Six-bladed beta-propeller, TolB-like | Tripartite Motif and NHL Repeat Containing E3 Ligases | Zinc finger, RING/FYVE/PHD-type | Zinc finger, RING-type | Zinc finger, RING-type, conserved site |
|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
UniProtKB:A0A8M1P6Z4
|
813 |
| Type | Name | Annotation Method | Has Havana Data | Length (nt) | Analysis |
|---|---|---|---|---|---|
| mRNA |
trim71-201
(1)
|
Ensembl | 7,688 nt |
Interactions and Pathways
No data available
Plasmids
No data available